etm: Empirical Transition Matrix

The etm (empirical transition matrix) package permits to estimate the matrix of transition probabilities for any time-inhomogeneous multistate model with finite state space using the Aalen-Johansen estimator. Functions for data preparation and for displaying are also included (Allignol et al., 2011 <doi:10.18637/jss.v038.i04>). Functionals of the Aalen-Johansen estimator, e.g., excess length-of-stay in an intermediate state, can also be computed (Allignol et al. 2011 <doi:10.1007/s00180-010-0200-x>).

Version: 1.0.4
Depends: R (≥ 3.0.0)
Imports: survival, lattice, data.table, Rcpp (≥ 0.11.4)
LinkingTo: Rcpp, RcppArmadillo
Suggests: ggplot2, kmi, geepack
Published: 2018-07-11
Author: Arthur Allignol
Maintainer: Arthur Allignol <arthur.allignol at>
License: MIT + file LICENSE
NeedsCompilation: yes
Citation: etm citation info
Materials: README
In views: Survival
CRAN checks: etm results


Reference manual: etm.pdf
Vignettes: Computing Cumulative Incidence Functions with the etmCIF Function
Package source: etm_1.0.4.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X binaries: r-release: etm_1.0.4.tgz, r-oldrel: etm_1.0.4.tgz
Old sources: etm archive

Reverse dependencies:

Reverse depends: compeir
Reverse imports: AHR, Biograph, Epi, mafs
Reverse suggests: markovchain
Reverse enhances: TPmsm


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